Gene: AT3G26900 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G26900
Transcript Identifier
AT3G26900.1
Gene Type
Coding gene
Location
3 : 9912314-9914424 : negative

Family

Gene family
HOM03D001965
(87 genes in 31 species)
specific family
Subfamily
ORTHO03D008922
(29 genes in 28 species)
specific family

Loading...please wait

Descriptions

Description
shikimate kinase like 1
Curated Summary
Encodes a protein with some sequence similarity to shikimate kinases, but a truncated form of this protein (lacking a putative N-terminal chloroplast transit peptide) does not have shikimate kinase activity in vitro. skl1-3 mutants have a variegated phenotype and skl1-8 mutants have an albino phenotype consistent with the observation of chloroplast defects in these mutants.
Show more...

Identifiers

Identifier Name
aliasArabidopsis thaliana shikimate kinase-like 1
aliasSKL1
aliasATSKL1
aliasshikimate kinase-like 1
uniprotQ9LW20

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009073RCA, TASGene Ontologyaromatic amino acid family biosynthetic process1 2
GO:0009658IMPUniProtchloroplast organization1 2 3 4
GO:0010027IMPUniProtthylakoid membrane organization1 2 3 4
GO:0000096RCAGene Ontologysulfur amino acid metabolic process1
GO:0006520RCAGene Ontologycellular amino acid metabolic process1
GO:0006546RCAGene Ontologyglycine catabolic process1
GO:0006569RCAGene Ontologytryptophan catabolic process1
GO:0006636RCAGene Ontologyunsaturated fatty acid biosynthetic process1
GO:0006733RCAGene Ontologyoxidoreduction coenzyme metabolic process1
GO:0006766RCAGene Ontologyvitamin metabolic process1
GO:0008652RCAGene Ontologycellular amino acid biosynthetic process1
GO:0009072RCAGene Ontologyaromatic amino acid family metabolic process1
GO:0009106RCAGene Ontologylipoate metabolic process1
GO:0009108RCAGene Ontologycoenzyme biosynthetic process1
GO:0009117RCAGene Ontologynucleotide metabolic process1
GO:0009684RCAGene Ontologyindoleacetic acid biosynthetic process1
GO:0009695RCAGene Ontologyjasmonic acid biosynthetic process1
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0015995RCAGene Ontologychlorophyll biosynthetic process1
GO:0016226RCAGene Ontologyiron-sulfur cluster assembly1
GO:0019288RCAGene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1
GO:0019344RCAGene Ontologycysteine biosynthetic process1
GO:0019748RCAGene Ontologysecondary metabolic process1
GO:0030154RCAGene Ontologycell differentiation1
GO:0044272RCAGene Ontologysulfur compound biosynthetic process1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004765IDAGene Ontologyshikimate kinase activity1
GO:0005524IEAPLAZA HomologyATP bindingHOM03D001965

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009570IDAUniProtchloroplast stroma1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000623Shikimate kinase/Threonine synthase-like 1
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
13.1.6.1.5amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase
No SignalP domains detected for this gene.