Gene: AT3G22400 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G22400
Transcript Identifier
AT3G22400.1
Gene Type
Coding gene
Location
3 : 7927011-7931167 : positive

Family

Gene family
HOM03D000170
(605 genes in 31 species)
specific family
Subfamily
ORTHO03D000003
(455 genes in 30 species)
specific family

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Descriptions

Description
PLAT/LH2 domain-containing lipoxygenase family protein
Curated Summary
Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem.
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Identifiers

Identifier Name
aliasArabidopsis thaliana lipoxygenase 5
aliasLOX5
aliasATLOX5
uniprotQ9LUW0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010311IMPUniProtlateral root formation1 2 3 4 5
GO:0048364IMPGene Ontologyroot development1
GO:0034440IDAUniProtlipid oxidation1 2 3 4 5
GO:1900366IMPUniProtnegative regulation of defense response to insect1 2 3 4 5
GO:0009611RCAGene Ontologyresponse to wounding1
GO:0009695RCAGene Ontologyjasmonic acid biosynthetic process1
GO:0055114IEAInterProoxidation-reduction process
GO:0031408IEAUniProtoxylipin biosynthetic process1 2 3 4
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT3G45140
GO:0009620ISOPLAZA Integrative Orthologyresponse to fungusAT3G45140 AT1G17420
GO:0009617ISOPLAZA Integrative Orthologyresponse to bacteriumAT3G45140 AT1G72520
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT3G45140 AT1G55020 AT1G17420
GO:0080027ISOPLAZA Integrative Orthologyresponse to herbivoreAT3G45140
GO:0040007ISOPLAZA Integrative OrthologygrowthAT1G72520 AT1G55020 AT1G17420
GO:0048653ISOPLAZA Integrative Orthologyanther developmentAT1G72520 AT1G17420
GO:0080086ISOPLAZA Integrative Orthologystamen filament developmentAT1G72520 AT1G17420
GO:0009901ISOPLAZA Integrative Orthologyanther dehiscenceAT1G72520 AT1G17420
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT1G72520 AT1G17420
GO:0010193ISOPLAZA Integrative Orthologyresponse to ozoneAT1G72520
GO:0030397ISOPLAZA Integrative Orthologymembrane disassemblyAT1G55020
GO:0009816ISOPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT1G55020
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT1G55020
GO:0009644ISOPLAZA Integrative Orthologyresponse to high light intensityAT1G17420
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000170
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016165IEA, IDAUniProtlinoleate 13S-lipoxygenase activity1 2 3 4 5
GO:1990136IDAUniProtlinoleate 9S-lipoxygenase activity1 2 3 4 5
GO:0005515IEAInterProprotein binding
GO:0005506IEAUniProtiron ion binding1 2 3 4
GO:0016702IEAInterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872IEAInterPrometal ion binding
GO:0016166ISOPLAZA Integrative Orthologyphytoene dehydrogenase activityOS08G39840
GO:0043169IEAPLAZA Homologycation bindingHOM03D000170
GO:0043167IEAPLAZA Homologyion bindingHOM03D000170
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000170
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03D000170
GO:0016491IEAPLAZA Homologyoxidoreductase activityHOM03D000170
GO:0016701IEAPLAZA Homologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygenHOM03D000170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0009507IDAUniProtchloroplast1 2 3 4 5
GO:0009536IDAGene Ontologyplastid1
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G45140
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT3G45140
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT3G45140
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G67560

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020834Lipoxygenase, conserved site
IPR001246Lipoxygenase, plant
IPR008976Lipase/lipooxygenase, PLAT/LH2
IPR013819Lipoxygenase, C-terminal
IPR001024PLAT/LH2 domain
IPR000907Lipoxygenase
IPR020833Lipoxygenase, iron binding site
IPR027433Lipoxygenase, domain 3

Mapman id Description
17.7.1.2hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
No SignalP domains detected for this gene.