Gene: AT3G22320 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G22320
Transcript Identifier
AT3G22320.1
Gene Type
Coding gene
Location
3 : 7891045-7892094 : negative

Family

Gene family
HOM03D001135
(135 genes in 31 species)
specific family
Subfamily
ORTHO03D002749
(40 genes in 31 species)
specific family

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Descriptions

Description
Eukaryotic rpb5 RNA polymerase subunit family protein
Curated Summary
Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.
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Identifiers

Identifier Name
aliasNRPD5
aliasNRPB5
aliasATRPABC24.3
aliasRNA POLYMERASE II FIFTH LARGEST SUBUNIT, A
aliasRPB5A
uniprotO81098

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEA, ISSUniProttranscription, DNA-templated1 2 3 4 5 6 7 8
GO:0006626RCAGene Ontologyprotein targeting to mitochondrion1
GO:0051604RCAGene Ontologyprotein maturation1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7 8
GO:0003899IEA, ISSUniProtDNA-directed RNA polymerase activity1 2 3 4 5 6 7 8
GO:0034062IEAPLAZA HomologyRNA polymerase activityHOM03D001135

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISM, IEAGene Ontologynucleus1
GO:0000418IDA, IPIUniProtDNA-directed RNA polymerase IV complex1 2 3 4 5 6 7 8
GO:0005665IDA, IPIUniProtDNA-directed RNA polymerase II, core complex1 2 3 4 5 6 7 8

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000783RNA polymerase, subunit H/Rpb5 C-terminal
IPR005571RNA polymerase, Rpb5, N-terminal
IPR020609Archaeal RpoH /eukaryotic RPB5 RNA polymerase subunit
IPR020608RNA polymerase, subunit H/Rpb5, conserved site

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.