Gene: AT3G20330 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G20330
Transcript Identifier
AT3G20330.1
Gene Type
Coding gene
Location
3 : 7090354-7091904 : negative

Family

Gene family
HOM03D001977
(86 genes in 31 species)
specific family
Subfamily
ORTHO03D002353
(42 genes in 31 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
PYRIMIDINE B
Curated Summary
encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis
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Identifiers

Identifier Name
aliasPYRB
aliasPYRIMIDINE B
uniprotP49077

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006520IEA, ISSUniProtcellular amino acid metabolic process1 2 3 4
GO:0016036IEPUniProtcellular response to phosphate starvation1 2 3 4
GO:0006164RCAGene Ontologypurine nucleotide biosynthetic process1
GO:0009220IGI, RCA, UniProtpyrimidine ribonucleotide biosynthetic process1 2 3 4 5
GO:0006207IEAUniProt'de novo' pyrimidine nucleobase biosynthetic process1 2 3
GO:0044205IEAUniProt'de novo' UMP biosynthetic process1 2 3

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016597IEA, ISSUniProtamino acid binding1 2 3 4
GO:0016743ISS, IEAGene Ontologycarboxyl- or carbamoyltransferase activity1
GO:0005515IPIGene Ontologyprotein binding1
GO:0004070IGI, IEA, UniProtaspartate carbamoyltransferase activity1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009570IDAUniProtchloroplast stroma1 2 3 4
GO:0005829IDAUniProtcytosol1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006130Aspartate/ornithine carbamoyltransferase
IPR002082Aspartate carbamoyltransferase
IPR006131Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
IPR006132Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding

Mapman id Description
23.1.1.2nucleotide metabolism.synthesis.pyrimidine.aspartate transcarbamoylase
No SignalP domains detected for this gene.