Gene: AT3G16980 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G16980
Transcript Identifier
AT3G16980.1
Gene Type
Coding gene
Location
3 : 5794526-5795699 : positive

Family

Gene family
HOM03D003916
(48 genes in 29 species)
specific family
Subfamily
ORTHO03D004585
(35 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
RNA polymerases M/15 Kd subunit
Curated Summary
One of two highly similar, non-catalytic subunits common to nuclear DNA-directed RNA polymerases II, IV and V; homologous to budding yeast RPB9. Appears to be redundant with At4g16265
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Identifiers

Identifier Name
aliasNRPB9A
aliasNRPE9A
aliasNRPD9A
uniprotQ6NLH0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEA, ISSUniProttranscription, DNA-templated1 2 3 4 5

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5
GO:0003899IEA, ISSUniProtDNA-directed RNA polymerase activity1 2 3 4 5
GO:0008270IEAUniProtzinc ion binding1 2 3 4
GO:0003676IEAInterPronucleic acid binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0000419IDA, IPIUniProtDNA-directed RNA polymerase V complex1 2 3 4 5
GO:0005665IDA, IPIUniProtDNA-directed RNA polymerase II, core complex1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001529DNA-directed RNA polymerase, M/15kDa subunit
IPR001222Zinc finger, TFIIS-type
IPR019761DNA-directed RNA polymerase M, 15kDa subunit, conserved site

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.