Gene: AT3G07390 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G07390
Transcript Identifier
AT3G07390.1
Gene Type
Coding gene
Location
3 : 2365452-2366273 : positive

Family

Gene family
HOM03D000275
(413 genes in 31 species)
specific family
Subfamily
ORTHO03D012121
(21 genes in 17 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
auxin-responsive family protein
Curated Summary
isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.
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Identifiers

Identifier Name
aliasAIR12
aliasAuxin-Induced in Root cultures 12
uniprotQ94BT2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009733IEPGene Ontologyresponse to auxin1
GO:0010102IEPGene Ontologylateral root morphogenesis1
GO:0030198TASGene Ontologyextracellular matrix organization1
GO:0006007RCAGene Ontologyglucose catabolic process1
GO:0009734IEAUniProtauxin mediated signaling pathway1 2 3 4 5 6

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005201TASGene Ontologyextracellular matrix structural constituent1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IEA, IDA, ISMUniProtplasma membrane1 2 3 4 5 6 7 8
GO:0005576TASGene Ontologyextracellular region1
GO:0031225IEA, TASUniProtanchored to membrane1 2 3 4 5 6 7
GO:0046658IDAGene Ontologyanchored to plasma membrane1
GO:0016021IEAPLAZA Homologyintegral to membraneHOM03D000275

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005018DOMON domain
IPR017214Uncharacterised conserved protein UCP037471

Mapman id Description
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
No SignalP domains detected for this gene.