PLAZA 3.0 Dicots gene overview : AT3G07120

Gene: AT3G07120 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G07120
Transcript Identifier: AT3G07120.1
Gene Type: Coding gene
Location: 3 : 2254560-2255642 : positive

Family

Gene family: HOM03D001240
(124 genes in 29 species)
specific family
Subfamily: ORTHO03D018895
(8 genes in 8 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: RING/U-box superfamily protein

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Identifiers

Identifier	Name

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008270	ISS, IEA	Gene Ontology	zinc ion binding	1
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISM	Gene Ontology	nucleus	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR001841	Zinc finger, RING-type

Mapman id	Description
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING

No SignalP domains detected for this gene.