Gene: AT3G05970 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G05970
Transcript Identifier
AT3G05970.1
Gene Type
Coding gene
Location
3 : 1786510-1791746 : negative

Family

Gene family
HOM03D000299
(384 genes in 31 species)
specific family
Subfamily
ORTHO03D001305
(53 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
long-chain acyl-CoA synthetase 6
Curated Summary
encode peroxisomal long-chain acyl-CoA synthetase (LACS) isozymes
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Identifiers

Identifier Name
aliaslong-chain acyl-CoA synthetase 6
aliasLACS6
aliasATLACS6
uniprotQ8LPS1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0001676IDA, RCA, TASGene Ontologylong-chain fatty acid metabolic process1 2 3
GO:0006631TASGene Ontologyfatty acid metabolic process1
GO:0010193IEPUniProtresponse to ozone1 2 3 4 5 6 7 8 9
GO:0002213RCAGene Ontologydefense response to insect1
GO:0006633RCAGene Ontologyfatty acid biosynthetic process1
GO:0006635RCAGene Ontologyfatty acid beta-oxidation1
GO:0008152IEAInterPrometabolic process
GO:0007275IEAUniProtmulticellular organismal development1 2 3 4 5 6 7 8

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004467IDA, TAS, UniProtlong-chain fatty acid-CoA ligase activity1 2 3 4 5 6 7 8 9 10
GO:0003824IEAInterProcatalytic activity
GO:0005524IEAUniProtATP binding1 2 3 4 5 6 7 8

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISMGene Ontologychloroplast1
GO:0005777IDAUniProtperoxisome1 2 3 4 5 6 7 8 9
GO:0016020IDAUniProtmembrane1 2 3 4 5 6 7 8 9
GO:0046861IEAUniProtglyoxysomal membrane1 2 3 4 5 6 7 8
GO:0009514IEAUniProtglyoxysome1 2 3 4 5 6 7 8

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000873AMP-dependent synthetase/ligase
IPR020845AMP-binding, conserved site

Mapman id Description
11.1.9lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase
No SignalP domains detected for this gene.