PLAZA 3.0 Dicots gene overview : AT3G05740

Gene: AT3G05740 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G05740
Transcript Identifier: AT3G05740.1
Gene Type: Coding gene
Location: 3 : 1698180-1701228 : positive

Family

Gene family: HOM03D000476
(268 genes in 30 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: RECQ helicase l1

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Identifiers

Identifier	Name
alias	RECQI1
alias	RECQ helicase l1
uniprot	Q9FT74

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0042631	IEP	UniProt	cellular response to water deprivation	1 2 3 4 5
GO:0070417	IEP	UniProt	cellular response to cold	1 2 3 4 5
GO:0006261	RCA	Gene Ontology	DNA-dependent DNA replication	1
GO:0006310	IEA	UniProt	DNA recombination	1 2 3 4

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008026	IEA, ISS	UniProt	ATP-dependent helicase activity	1 2 3 4 5
GO:0004386	IEA	InterPro	helicase activity
GO:0003676	IEA	UniProt	nucleic acid binding	1 2 3 4
GO:0005524	IEA	UniProt	ATP binding	1 2 3 4
GO:0046872	IEA	UniProt	metal ion binding	1 2 3 4
GO:0042623	IEA	PLAZA Homology	ATPase activity, coupled	HOM03D000476
GO:0016887	IEA	PLAZA Homology	ATPase activity	HOM03D000476
GO:0070035	IEA	PLAZA Homology	purine NTP-dependent helicase activity	HOM03D000476

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IEA, ISM	UniProt	nucleus	1 2 3 4 5

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Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR004589	DNA helicase, ATP-dependent, RecQ type
IPR001650	Helicase, C-terminal
IPR014001	Helicase, superfamily 1/2, ATP-binding domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR011545	DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Mapman id	Description
28.99	DNA.unspecified

No SignalP domains detected for this gene.