Gene: AT3G05200 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G05200
Transcript Identifier
AT3G05200.1
Gene Type
Coding gene
Location
3 : 1477377-1478573 : positive

Family

Gene family
HOM03D000017
(2380 genes in 31 species)
specific family
Subfamily
ORTHO03D002416
(42 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
RING/U-box superfamily protein
Curated Summary
Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).
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Identifiers

Identifier Name
aliasATL6
aliasArabidopsis toxicos en levadura 6
uniprotQ8RXX9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567IDAGene Ontologyprotein ubiquitination1
GO:0010200IEP, RCA, UniProtresponse to chitin1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0009814IEPGene Ontologydefense response, incompatible interaction1
GO:0009816IMPUniProtdefense response to bacterium, incompatible interaction1 2 3 4 5 6 7 8 9 10 11 12
GO:0002679RCAGene Ontologyrespiratory burst involved in defense response1
GO:0035556RCAGene Ontologyintracellular signal transduction1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEA, ISSUniProtzinc ion binding1 2 3 4 5 6 7 8 9 10 11 12
GO:0004842IDAUniProtubiquitin-protein ligase activity1 2 3 4 5 6 7 8 9 10 11 12
GO:0005515IEAInterProprotein binding
GO:0043169IEAPLAZA Homologycation bindingHOM03D000017
GO:0005488IEAPLAZA HomologybindingHOM03D000017
GO:0043167IEAPLAZA Homologyion bindingHOM03D000017
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000017
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000017

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1
GO:0005886IDAUniProtplasma membrane1 2 3 4 5 6 7 8 9 10 11 12
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5 6 7 8 9 10 11

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
SignalP Description
SignalP-TMSignal Peptide detected using TM network