Gene: AT3G04790 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G04790
Transcript Identifier
AT3G04790.1
Gene Type
Coding gene
Location
3 : 1313365-1314195 : positive

Family

Gene family
HOM03D001102
(138 genes in 31 species)
specific family
Subfamily
ORTHO03D003533
(37 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Ribose 5-phosphate isomerase, type A protein
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Identifiers

Identifier Name
aliasEMB3119
aliasEMBRYO DEFECTIVE 3119

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042742IEP, RCAGene Ontologydefense response to bacterium1 2
GO:0019253NASGene Ontologyreductive pentose-phosphate cycle1
GO:0000096RCAGene Ontologysulfur amino acid metabolic process1
GO:0000165RCAGene OntologyMAPK cascade1
GO:0006546RCAGene Ontologyglycine catabolic process1
GO:0006569RCAGene Ontologytryptophan catabolic process1
GO:0006612RCAGene Ontologyprotein targeting to membrane1
GO:0006636RCAGene Ontologyunsaturated fatty acid biosynthetic process1
GO:0006733RCAGene Ontologyoxidoreduction coenzyme metabolic process1
GO:0006766RCAGene Ontologyvitamin metabolic process1
GO:0008652RCAGene Ontologycellular amino acid biosynthetic process1
GO:0009072RCAGene Ontologyaromatic amino acid family metabolic process1
GO:0009106RCAGene Ontologylipoate metabolic process1
GO:0009108RCAGene Ontologycoenzyme biosynthetic process1
GO:0009117RCAGene Ontologynucleotide metabolic process1
GO:0009409RCAGene Ontologyresponse to cold1
GO:0009595RCAGene Ontologydetection of biotic stimulus1
GO:0009684RCAGene Ontologyindoleacetic acid biosynthetic process1
GO:0009695RCAGene Ontologyjasmonic acid biosynthetic process1
GO:0009697RCAGene Ontologysalicylic acid biosynthetic process1
GO:0009814RCAGene Ontologydefense response, incompatible interaction1
GO:0009862RCAGene Ontologysystemic acquired resistance, salicylic acid mediated signaling pathway1
GO:0009867RCAGene Ontologyjasmonic acid mediated signaling pathway1
GO:0010200RCAGene Ontologyresponse to chitin1
GO:0010310RCAGene Ontologyregulation of hydrogen peroxide metabolic process1
GO:0010363RCAGene Ontologyregulation of plant-type hypersensitive response1
GO:0019288RCAGene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1
GO:0019344RCAGene Ontologycysteine biosynthetic process1
GO:0019684RCAGene Ontologyphotosynthesis, light reaction1
GO:0019748RCAGene Ontologysecondary metabolic process1
GO:0031348RCAGene Ontologynegative regulation of defense response1
GO:0043900RCAGene Ontologyregulation of multi-organism process1
GO:0044272RCAGene Ontologysulfur compound biosynthetic process1
GO:0050832RCAGene Ontologydefense response to fungus1
GO:0009052IEAInterPropentose-phosphate shunt, non-oxidative branch
GO:0019362IEAPLAZA Homologypyridine nucleotide metabolic processHOM03D001102
GO:0006098IEAPLAZA Homologypentose-phosphate shuntHOM03D001102
GO:0016052IEAPLAZA Homologycarbohydrate catabolic processHOM03D001102
GO:0046365IEAPLAZA Homologymonosaccharide catabolic processHOM03D001102
GO:0006739IEAPLAZA HomologyNADP metabolic processHOM03D001102
GO:0044724IEAPLAZA Homologysingle-organism carbohydrate catabolic processHOM03D001102
GO:0006740IEAPLAZA HomologyNADPH regenerationHOM03D001102
GO:0046496IEAPLAZA Homologynicotinamide nucleotide metabolic processHOM03D001102
GO:0006007IEAPLAZA Homologyglucose catabolic processHOM03D001102
GO:0006006IEAPLAZA Homologyglucose metabolic processHOM03D001102
GO:0006732IEAPLAZA Homologycoenzyme metabolic processHOM03D001102
GO:0019321IEAPLAZA Homologypentose metabolic processHOM03D001102
GO:0072524IEAPLAZA Homologypyridine-containing compound metabolic processHOM03D001102
GO:0019320IEAPLAZA Homologyhexose catabolic processHOM03D001102

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004751IEAInterProribose-5-phosphate isomerase activity
GO:0016860IEAPLAZA Homologyintramolecular oxidoreductase activityHOM03D001102
GO:0016861IEAPLAZA Homologyintramolecular oxidoreductase activity, interconverting aldoses and ketosesHOM03D001102

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009941IDAGene Ontologychloroplast envelope1
GO:0009535IDAGene Ontologychloroplast thylakoid membrane1
GO:0009570IDAGene Ontologychloroplast stroma1
GO:0009579IDAGene Ontologythylakoid1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004788Ribose 5-phosphate isomerase, type A
IPR020672Ribose-5-phosphate isomerase, type A, subgroup

Mapman id Description
1.3.10PS.calvin cycle.Rib5P Isomerase
7.2.4OPP.non-reductive PP.ribose 5-phosphate isomerase
No SignalP domains detected for this gene.