Gene: AT2G41340 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G41340
Transcript Identifier
AT2G41340.1
Gene Type
Coding gene
Location
2 : 17229026-17230442 : positive

Family

Gene family
HOM03D001135
(135 genes in 31 species)
specific family
Subfamily
ORTHO03D026344
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
RNA polymerase II fifth largest subunit, D
Curated Summary
NRPE5-like protein of unknown function; homologous to budding yeast RPB5
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Identifiers

Identifier Name
aliasRPB5D
alias'RNA polymerase II fifth largest subunit, D'
uniprotQ9ZVB9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEA, ISSUniProttranscription, DNA-templated1 2 3 4 5

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5
GO:0003899IEA, ISSUniProtDNA-directed RNA polymerase activity1 2 3 4 5
GO:0034062IEAPLAZA HomologyRNA polymerase activityHOM03D001135

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISM, IEAGene Ontologynucleus1
GO:0000418IDAUniProtDNA-directed RNA polymerase IV complex1 2 3 4
GO:0000419IDAUniProtDNA-directed RNA polymerase V complex1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005571RNA polymerase, Rpb5, N-terminal
IPR000783RNA polymerase, subunit H/Rpb5 C-terminal

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.