Gene: AT2G40080 (Arabidopsis thaliana)

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Gene Identifier
AT2G40080
Transcript Identifier
AT2G40080.1
Gene Type
Coding gene
Location
2 : 16734545-16734880 : negative

Family

Gene family
HOM03D001174
(130 genes in 29 species)
specific family
Subfamily
ORTHO03D007783
(30 genes in 20 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Protein of unknown function (DUF1313)
Curated Summary
Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.
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Identifiers

Identifier Name
aliasELF4
aliasEARLY FLOWERING 4
uniprotO04211

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009648IEP, IMPGene Ontologyphotoperiodism1 2
GO:0009909IMPUniProtregulation of flower development1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0042753IMPUniProtpositive regulation of circadian rhythm1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0010114IMPUniProtresponse to red light1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0010017IMPUniProtred or far-red light signaling pathway1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0009649IMPUniProtentrainment of circadian clock1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0048573IMPUniProtphotoperiodism, flowering1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0080167IEPUniProtresponse to karrikin1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0009908IEAUniProtflower development1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009585IEAUniProtred, far-red light phototransduction1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0048511IEAUniProtrhythmic process1 2 3 4 5 6 7 8 9 10 11 12 13 14

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042803IDAUniProtprotein homodimerization activity1 2 3 4 5 6 7 8 9 10 11 12 13 14 15

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009741Protein of unknown function DUF1313

Mapman id Description
30.11signalling.light
No SignalP domains detected for this gene.