Gene: AT2G27100 (Arabidopsis thaliana)

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Gene Identifier
AT2G27100
Transcript Identifier
AT2G27100.1
Gene Type
Coding gene
Location
2 : 11572587-11576357 : positive

Family

Gene family
HOM03D003178
(57 genes in 31 species)
specific family
Subfamily
ORTHO03D001386
(51 genes in 31 species)
specific family

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Descriptions

Description
C2H2 zinc-finger protein SERRATE (SE)
Curated Summary
Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.
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Identifiers

Identifier Name
aliasSERRATE
aliasSE
uniprotQ9ZVD0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048367IMPUniProtshoot system development1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0006355RCA, TASGene Ontologyregulation of transcription, DNA-dependent1 2
GO:0016568TASUniProtchromatin modification1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0048509IMPUniProtregulation of meristem development1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:2000011IMPUniProtregulation of adaxial/abaxial pattern formation1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0010267IMPUniProtproduction of ta-siRNAs involved in RNA interference1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0031053IMPUniProtprimary miRNA processing1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0008380IMPUniProtRNA splicing1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0000398RCAGene OntologymRNA splicing, via spliceosome1
GO:0007346RCAGene Ontologyregulation of mitotic cell cycle1
GO:0043687RCAGene Ontologypost-translational protein modification1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0006397IEAUniProtmRNA processing1 2 3 4 5 6 7 8 9 10 11 12 13

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0003677ISSUniProtDNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0005515IPIGene Ontologyprotein binding1
GO:0046872IEAUniProtmetal ion binding1 2 3 4 5 6 7 8 9 10 11 12 13

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, ISSGene Ontologynucleus1 2 3
GO:0009507IDAUniProtchloroplast1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0005730IDAUniProtnucleolus1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0010445IDAUniProtnuclear dicing body1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0016607IDAUniProtnuclear speck1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0005829IDAUniProtcytosol1 2 3 4 5 6 7 8 9 10 11 12 13 14

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR021933Protein of unknown function DUF3546
IPR007042Arsenite-resistance protein 2
IPR007087Zinc finger, C2H2

Mapman id Description
27.3.11RNA.regulation of transcription.C2H2 zinc finger family
No SignalP domains detected for this gene.