Gene: AT2G24790 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G24790
Transcript Identifier
AT2G24790.1
Gene Type
Coding gene
Location
2 : 10566959-10567946 : positive

Family

Gene family
HOM03D000235
(450 genes in 31 species)
specific family
Subfamily
ORTHO03D027384
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
CONSTANS-like 3
Curated Summary
Positive regulator of photomorphogenesis that acts downstream of COP1 but can promote lateral root development independently of COP1 and also function as a daylength-sensitive regulator of shoot branching.
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Identifiers

Identifier Name
aliasB-box domain protein 4
aliasATCOL3
aliasBBX4
aliasCONSTANS-like 3
aliasCOL3
uniprotQ9SK53

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010099IMPUniProtregulation of photomorphogenesis1 2 3 4
GO:0010161IMPUniProtred light signaling pathway1 2 3 4
GO:0009637RCAGene Ontologyresponse to blue light1
GO:0009644RCAGene Ontologyresponse to high light intensity1
GO:0009744RCAGene Ontologyresponse to sucrose1
GO:0010114RCAGene Ontologyresponse to red light1
GO:0010155RCAGene Ontologyregulation of proton transport1
GO:0010218RCAGene Ontologyresponse to far red light1
GO:0032880RCAGene Ontologyregulation of protein localization1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEA, ISSUniProtzinc ion binding1 2 3 4
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0043169IEAPLAZA Homologycation bindingHOM03D000235
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000235
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000235

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5
GO:0005622IEAInterProintracellular
GO:0044464IEAPLAZA Homologycell partHOM03D000235
GO:0005623IEAPLAZA HomologycellHOM03D000235

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000315Zinc finger, B-box
IPR010402CCT domain

Mapman id Description
27.3.7RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBC2C2-CO-like
PlantTFDBCO-like