Gene: AT2G15430 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G15430
Transcript Identifier
AT2G15430.1
Gene Type
Coding gene
Location
2 : 6733661-6735482 : positive

Family

Gene family
HOM03D003568
(51 genes in 30 species)
specific family
Subfamily
ORTHO03D003394
(38 genes in 30 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
DNA-directed RNA polymerase family protein
Curated Summary
Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V.
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Identifiers

Identifier Name
aliasNRPD3
aliasRPB35.5A
aliasNRPE3A
aliasRBP36A
aliasNRPB3
uniprotQ39211

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEA, ISSUniProttranscription, DNA-templated1 2 3 4 5 6 7

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7
GO:0003899IEA, ISSUniProtDNA-directed RNA polymerase activity1 2 3 4 5 6 7
GO:0046983IEAInterProprotein dimerization activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMGene Ontologynucleus1 2
GO:0005730IDAUniProtnucleolus1 2 3 4 5 6 7
GO:0005737IDAUniProtcytoplasm1 2 3 4 5 6 7
GO:0000418IDA, IPIUniProtDNA-directed RNA polymerase IV complex1 2 3 4 5 6 7
GO:0000419IDA, IPIUniProtDNA-directed RNA polymerase V complex1 2 3 4 5 6 7
GO:0005665IDA, IPIUniProtDNA-directed RNA polymerase II, core complex1 2 3 4 5 6 7

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009025DNA-directed RNA polymerase, RBP11-like dimerisation domain
IPR001514DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR011262DNA-directed RNA polymerase, insert domain

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.