Gene: AT2G02070 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G02070
Transcript Identifier
AT2G02070.1
Gene Type
Coding gene
Location
2 : 505523-509154 : positive

Family

Gene family
HOM03D000153
(673 genes in 29 species)
specific family
Subfamily
ORTHO03D006418
(32 genes in 21 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
indeterminate(ID)-domain 5
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Identifiers

Identifier Name
aliasAtIDD5
aliasIDD5
aliasindeterminate(ID)-domain 5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355TASGene Ontologyregulation of transcription, DNA-dependent1
GO:0006417RCAGene Ontologyregulation of translation1
GO:0009657RCAGene Ontologyplastid organization1
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0030154RCAGene Ontologycell differentiation1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676ISS, IEAGene Ontologynucleic acid binding1
GO:0008270ISSGene Ontologyzinc ion binding1
GO:0003700ISSGene Ontologysequence-specific DNA binding transcription factor activity1
GO:0046872IEAInterPrometal ion binding
GO:0043169IEAPLAZA Homologycation bindingHOM03D000153
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000153
GO:0043167IEAPLAZA Homologyion bindingHOM03D000153
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000153

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007087Zinc finger, C2H2
IPR015880Zinc finger, C2H2-like
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain

Mapman id Description
27.3.11RNA.regulation of transcription.C2H2 zinc finger family
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_458MGP;AT1G14580;AtIDD7;AtIDD5;AtIDD4;AtIDD12;JKD;AT5G66730Not available593 genes in 10 species

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DatabaseType
PlnTFDBC2H2
PlantTFDBC2H2