Gene: AT1G79380 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G79380
Transcript Identifier
AT1G79380.1
Gene Type
Coding gene
Location
1 : 29860812-29863023 : positive

Family

Gene family
HOM03D000591
(229 genes in 30 species)
specific family
Subfamily
ORTHO03D016624
(10 genes in 8 species)
specific family

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Descriptions

Description
Ca(2)-dependent phospholipid-binding protein (Copine) family
Curated Summary
Encodes a ubiquitin ligase that is an essential upstream modulator of JA signaling in response to various stimuli.
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Identifiers

Identifier Name
aliasRING DOMAIN LIGASE 4
aliasRGLG4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006487RCAGene Ontologyprotein N-linked glycosylation1
GO:0006816RCAGene Ontologycalcium ion transport1
GO:0009690RCAGene Ontologycytokinin metabolic process1
GO:0009611IMPGene Ontologyresponse to wounding1
GO:0009867IMPGene Ontologyjasmonic acid mediated signaling pathway1
GO:0042742IMPGene Ontologydefense response to bacterium1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842IDAGene Ontologyubiquitin-protein ligase activity1
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISMGene Ontologyplasma membrane1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR002035von Willebrand factor, type A
IPR010734Copine

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.