Gene: AT1G77470 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G77470
Transcript Identifier
AT1G77470.1
Gene Type
Coding gene
Location
1 : 29112194-29114323 : negative

Family

Gene family
HOM03D001383
(114 genes in 31 species)
specific family
Subfamily
ORTHO03D006202
(33 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
replication factor C subunit 3
Curated Summary
Encodes a protein with high homology to the Replication Factor C, Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent.
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Identifiers

Identifier Name
aliasEMBRYO DEFECTIVE 2810
aliasEMB2810
aliasreplication factor C 5
aliasRFC5
aliasreplication factor C subunit 3
aliasRFC3
uniprotQ9CAQ8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031348IMPUniProtnegative regulation of defense response1 2 3 4 5
GO:0000398RCAGene OntologymRNA splicing, via spliceosome1
GO:0006312RCAGene Ontologymitotic recombination1
GO:0006346RCAGene Ontologymethylation-dependent chromatin silencing1
GO:0009560RCAGene Ontologyembryo sac egg cell differentiation1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0016246RCAGene OntologyRNA interference1
GO:0016570RCAGene Ontologyhistone modification1
GO:0031048RCAGene Ontologychromatin silencing by small RNA1
GO:0048449RCAGene Ontologyfloral organ formation1
GO:0051567RCAGene Ontologyhistone H3-K9 methylation1
GO:0006260IEAUniProtDNA replication1 2 3 4
GO:0006952IEAUniProtdefense response1 2 3 4

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016887ISSGene OntologyATPase activity1
GO:0017111IEAUniProtnucleoside-triphosphatase activity1 2 3 4
GO:0000166IEAInterPronucleotide binding
GO:0003677IEAUniProtDNA binding1 2 3 4
GO:0005524IEAUniProtATP binding1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5
GO:0005663ISSGene OntologyDNA replication factor C complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003593AAA+ ATPase domain
IPR013748Replication factor C, C-terminal domain
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR003959ATPase, AAA-type, core
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.