Gene: AT1G72560 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G72560
Transcript Identifier
AT1G72560.1
Gene Type
Coding gene
Location
1 : 27325026-27329467 : negative

Family

Gene family
HOM03D005942
(36 genes in 30 species)
specific family
Subfamily
ORTHO03D008523
(29 genes in 27 species)
specific family

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Descriptions

Description
ARM repeat superfamily protein
Curated Summary
Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development.
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Identifiers

Identifier Name
aliasPAUSED
aliasPSD
uniprotQ7PC79

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006409IGI, ISS, UniProttRNA export from nucleus1 2 3 4 5 6
GO:0009908IMPUniProtflower development1 2 3 4 5
GO:0010014IMPUniProtmeristem initiation1 2 3 4 5
GO:0006406RCAGene OntologymRNA export from nucleus1
GO:0006499RCAGene OntologyN-terminal protein myristoylation1
GO:0006606RCAGene Ontologyprotein import into nucleus1
GO:0009640RCAGene Ontologyphotomorphogenesis1
GO:0009793RCAGene Ontologyembryo development ending in seed dormancy1
GO:0009845RCAGene Ontologyseed germination1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0009933RCAGene Ontologymeristem structural organization1
GO:0010162RCAGene Ontologyseed dormancy process1
GO:0010182RCAGene Ontologysugar mediated signaling pathway1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0016567RCAGene Ontologyprotein ubiquitination1
GO:0019915RCAGene Ontologylipid storage1
GO:0050826RCAGene Ontologyresponse to freezing1
GO:0008033IEAUniProttRNA processing1 2 3 4

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000049IEA, ISSUniProttRNA binding1 2 3 4 5
GO:0015932IGIUniProtnucleobase-containing compound transmembrane transporter activity1 2 3 4 5
GO:0005488IEAInterProbinding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005643IDAGene Ontologynuclear pore1
GO:0005829IDAUniProtcytosol1 2 3 4 5
GO:0005634IEAUniProtnucleus1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011989Armadillo-like helical
IPR013598Exportin-1/Importin-beta-like
IPR016024Armadillo-type fold

Mapman id Description
34.99transport.misc
No SignalP domains detected for this gene.