Gene: AT1G72370 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G72370
Transcript Identifier
AT1G72370.1
Gene Type
Coding gene
Location
1 : 27243148-27244842 : negative

Family

Gene family
HOM03D001923
(88 genes in 31 species)
specific family
Subfamily
ORTHO03D001025
(60 genes in 31 species)
specific family

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Descriptions

Description
40s ribosomal protein SA
Curated Summary
acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.
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Identifiers

Identifier Name
aliasAP40
aliasP40
aliasRP40
alias40s ribosomal protein SA
aliasRPSAA
uniprotQ08682

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000028IBAUniProtribosomal small subunit assembly1 2 3 4 5 6 7 8
GO:0000447IBAUniProtendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1 2 3 4 5 6 7 8
GO:0000461IBAUniProtendonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1 2 3 4 5 6 7 8
GO:0006407IBAUniProtrRNA export from nucleus1 2 3 4 5 6 7 8
GO:0006412IBA, ISSIEA, UniProttranslation1 2 3 4 5 6 7 8 9
GO:0042256IDAGene Ontologymature ribosome assembly1
GO:0006970IEPGene Ontologyresponse to osmotic stress1
GO:0009651IEP, RCA, UniProtresponse to salt stress1 2 3 4 5 6 7 8 9
GO:0001510RCAGene OntologyRNA methylation1
GO:0006096RCAGene Ontologyglycolysis1
GO:0006833RCAGene Ontologywater transport1
GO:0006972RCAGene Ontologyhyperosmotic response1
GO:0007030RCAGene OntologyGolgi organization1
GO:0009266RCAGene Ontologyresponse to temperature stimulus1
GO:0009664RCAGene Ontologyplant-type cell wall organization1
GO:0042545RCAGene Ontologycell wall modification1
GO:0046686RCAGene Ontologyresponse to cadmium ion1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735IBA, ISSIEA, UniProtstructural constituent of ribosome1 2 3 4 5 6 7 8 9

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IDA, ISMGene Ontologycytoplasm1 2
GO:0030686IBAUniProt90S preribosome1 2 3 4 5 6 7 8
GO:0022627IDA, ISS, UniProtcytosolic small ribosomal subunit1 2 3 4 5 6 7 8 9
GO:0005634IDAUniProtnucleus1 2 3 4 5 6 7 8
GO:0009507IDAUniProtchloroplast1 2 3 4 5 6 7 8
GO:0022626IDAGene Ontologycytosolic ribosome1
GO:0005886IDAUniProtplasma membrane1 2 3 4 5 6 7 8
GO:0016020IDAGene Ontologymembrane1
GO:0005829IDAGene Ontologycytosol1
GO:0009506IDAUniProtplasmodesma1 2 3 4 5 6 7 8
GO:0005794RCAGene OntologyGolgi apparatus1
GO:0015935IDA, IEAGene Ontologysmall ribosomal subunit1
GO:0005622IEAInterProintracellular
GO:0005840IEAInterProribosome

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001865Ribosomal protein S2
IPR027498Ribosomal protein S2, eukaryotic
IPR018130Ribosomal protein S2, conserved site
IPR023591Ribosomal protein S2, flavodoxin-like domain
IPR005707Ribosomal protein S2, eukaryotic/archaeal

Mapman id Description
29.2.1.2.1.31protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA
No SignalP domains detected for this gene.