Gene: AT1G66170 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G66170
Transcript Identifier
AT1G66170.1
Gene Type
Coding gene
Location
1 : 24638793-24641222 : negative

Family

Gene family
HOM03D000832
(170 genes in 31 species)
specific family
Subfamily
ORTHO03D002085
(44 genes in 27 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
RING/FYVE/PHD zinc finger superfamily protein
Curated Summary
encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus.
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Identifiers

Identifier Name
aliasMMD1
aliasMALE MEIOCYTE DEATH 1
uniprotQ7X6Y7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEA, ISSUniProtregulation of transcription, DNA-dependent1 2 3 4
GO:0007060IMPUniProtmale meiosis chromosome segregation1 2 3
GO:0048235IMPUniProtpollen sperm cell differentiation1 2 3
GO:0006351IEAUniProttranscription, DNA-templated1 2 3

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISSGene OntologyDNA binding1
GO:0005515IEAInterProprotein binding
GO:0008270IEAUniProtzinc ion binding1 2 3

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISMGene Ontologymitochondrion1
GO:0005634IDAUniProtnucleus1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001965Zinc finger, PHD-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR011011Zinc finger, FYVE/PHD-type
IPR019787Zinc finger, PHD-finger
IPR019786Zinc finger, PHD-type, conserved site

Mapman id Description
27.3.67RNA.regulation of transcription.putative transcription regulator
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBPHD