Gene: AT1G64860 (Arabidopsis thaliana)

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Gene Identifier
AT1G64860
Transcript Identifier
AT1G64860.1
Gene Type
Coding gene
Location
1 : 24098497-24100746 : positive

Family

Gene family
HOM03D001904
(89 genes in 31 species)
specific family
Subfamily
ORTHO03D003539
(37 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
sigma factor A
Curated Summary
Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme
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Identifiers

Identifier Name
aliasSIG1
aliasSIGB
aliasSIG2
aliassigma factor A
aliasSIGA
aliasRNApolymerase sigma subunit 2
aliasRPOD1
aliasRNA POLYMERASE SIGMA SUBUNIT 1
uniprotO24629

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IDA, ISSIEA, UniProtregulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0071482IEPUniProtcellular response to light stimulus1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0006352IDA, TASIEA, UniProtDNA-dependent transcription, initiation1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:2001141IMPGene Ontologyregulation of RNA biosynthetic process1
GO:0071461IDAUniProtcellular response to redox state1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0080005IDAUniProtphotosystem stoichiometry adjustment1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0006833RCAGene Ontologywater transport1
GO:0009651RCAGene Ontologyresponse to salt stress1
GO:0009750RCAGene Ontologyresponse to fructose1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0003700IEA, ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0003899ISSGene OntologyDNA-directed RNA polymerase activity1
GO:0005515IPIGene Ontologyprotein binding1
GO:0001053IMPUniProtplastid sigma factor activity1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0016987ISS, IEAGene Ontologysigma factor activity1
GO:0000990IEAPLAZA Homologycore RNA polymerase binding transcription factor activityHOM03D001904
GO:0000996IEAPLAZA Homologycore DNA-dependent RNA polymerase binding promoter specificity activityHOM03D001904

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISM, UniProtchloroplast1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013324RNA polymerase sigma factor, region 3/4
IPR007630RNA polymerase sigma-70 region 4
IPR013325RNA polymerase sigma factor, region 2
IPR000943RNA polymerase sigma-70
IPR011991Winged helix-turn-helix DNA-binding domain
IPR007627RNA polymerase sigma-70 region 2
IPR007624RNA polymerase sigma-70 region 3
IPR014284RNA polymerase sigma-70 like domain

Mapman id Description
27.3.85RNA.regulation of transcription.sigma like plant
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSigma70-like