Gene: AT1G55250 (Arabidopsis thaliana)

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Gene Identifier
AT1G55250
Transcript Identifier
AT1G55250.1
Gene Type
Coding gene
Location
1 : 20607214-20612302 : positive

Family

Gene family
HOM03D002033
(84 genes in 31 species)
specific family
Subfamily
ORTHO03D019955
(7 genes in 6 species)
specific family

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Descriptions

Description
histone mono-ubiquitination 2
Curated Summary
Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.
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Identifiers

Identifier Name
aliasHUB2
aliashistone mono-ubiquitination 2
uniprotQ9C895

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010162IMPUniProtseed dormancy process1 2 3 4 5
GO:0010390IMPUniProthistone monoubiquitination1 2 3 4 5
GO:0009965IMPUniProtleaf morphogenesis1 2 3 4 5
GO:0010228IMP, RCA, UniProtvegetative to reproductive phase transition of meristem1 2 3 4 5 6
GO:0033523IMPUniProthistone H2B ubiquitination1 2 3 4 5
GO:0006355RCAGene Ontologyregulation of transcription, DNA-dependent1
GO:0007346RCAGene Ontologyregulation of mitotic cell cycle1
GO:0043687RCAGene Ontologypost-translational protein modification1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042803IPIGene Ontologyprotein homodimerization activity1
GO:0005515IEAInterProprotein binding
GO:0008270IEAUniProtzinc ion binding1 2 3 4
GO:0016874IEAUniProtligase activity1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR017907Zinc finger, RING-type, conserved site
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.99protein.degradation.ubiquitin.E3.unspecified
No SignalP domains detected for this gene.