Gene: AT1G50490 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G50490
Transcript Identifier
AT1G50490.1
Gene Type
Coding gene
Location
1 : 18705005-18706303 : negative

Family

Gene family
HOM03D000071
(1215 genes in 31 species)
specific family
Subfamily
ORTHO03D044889
(3 genes in 3 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
ubiquitin-conjugating enzyme 20
Curated Summary
Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells.
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Identifiers

Identifier Name
aliasubiquitin-conjugating enzyme 20
aliasUBC20
uniprotQ8L7T3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008283IEP, RCA, UniProtcell proliferation1 2 3 4 5 6 7
GO:0000226RCAGene Ontologymicrotubule cytoskeleton organization1
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0042023RCAGene OntologyDNA endoreduplication1
GO:0043161RCAGene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0043248RCAGene Ontologyproteasome assembly1
GO:0051510RCAGene Ontologyregulation of unidimensional cell growth1
GO:0051788RCAGene Ontologyresponse to misfolded protein1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842ISSUniProtubiquitin-protein ligase activity1 2 3 4 5 6
GO:0016881IEAInterProacid-amino acid ligase activity
GO:0005524IEAUniProtATP binding1 2 3 4 5
GO:0016874IEAPLAZA Homologyligase activityHOM03D000071
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03D000071
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000071

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000608Ubiquitin-conjugating enzyme, E2
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR023313Ubiquitin-conjugating enzyme, active site

Mapman id Description
29.5.11.3protein.degradation.ubiquitin.E2
No SignalP domains detected for this gene.