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BLAST
WorkbenchGene: AT1G35460 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G35460
- Transcript Identifier
- AT1G35460.1
- Gene Type
- Coding gene
- Location
- 1 : 13040092-13041907 : positive
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Identifiers
| Identifier | Name |
|---|---|
| alias | FLOWERING BHLH 1 |
| alias | FBH1 |
| uniprot | Q9C8P8 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-dependent | 1 |
| GO:0006351 | IEA | UniProt | transcription, DNA-templated | 1 2 3 4 5 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003677 | IEA, ISS | UniProt | DNA binding | 1 2 3 4 5 6 |
| GO:0003700 | ISS | UniProt | sequence-specific DNA binding transcription factor activity | 1 2 3 4 5 6 |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0005515 | IEA | PLAZA Homology | protein binding | HOM03D000046 |
| GO:0005488 | IEA | PLAZA Homology | binding | HOM03D000046 |
Cellular Component
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 27.3.6 | RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family |
No SignalP domains detected for this gene.
Binding sites bound by this Transcription Factor
| Binding site | Name | Description | Counts |
|---|---|---|---|
| Matrix_511 | AT1G05805;AT1G35460;AT1G51140;AT2G42280;AT2G43140;AT4G09180 | Not available | 1229 genes in 10 species |
View full overview