Gene: AT1G32361 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G32361
- Transcript Identifier
- AT1G32361.1
- Gene Type
- Coding gene
- Location
- 1 : 11675531-11676529 : positive
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
RING/U-box superfamily protein
- Curated Summary
-
Putative RING-H2 finger protein ATL1F precursor.
Identifiers
Identifier | Name |
---|---|
alias | ATL1F |
uniprot | Q9LQM2 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016567 | IEA | UniProt | protein ubiquitination | 1 2 3 4 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0008270 | IEA | UniProt | zinc ion binding | 1 2 3 4 |
GO:0043169 | IEA | PLAZA Homology | cation binding | HOM03D000017 |
GO:0005488 | IEA | PLAZA Homology | binding | HOM03D000017 |
GO:0043167 | IEA | PLAZA Homology | ion binding | HOM03D000017 |
GO:0046914 | IEA | PLAZA Homology | transition metal ion binding | HOM03D000017 |
GO:0046872 | IEA | PLAZA Homology | metal ion binding | HOM03D000017 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005634 | ISM | Gene Ontology | nucleus | 1 |
GO:0016021 | IEA | UniProt | integral to membrane | 1 2 3 4 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
29.5.11.4.2 | protein.degradation.ubiquitin.E3.RING |
SignalP | Description |
---|---|
SignalP-noTM | Signal Peptide detected using noTM network |