Gene: AT1G32240 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G32240
Transcript Identifier
AT1G32240.1
Gene Type
Coding gene
Location
1 : 11625882-11630355 : negative

Family

Gene family
HOM03D000096
(1015 genes in 31 species)
specific family
Subfamily
ORTHO03D007100
(31 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Homeodomain-like superfamily protein
Curated Summary
Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.
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Identifiers

Identifier Name
aliasKANADI 2
aliasKAN2
uniprotQ9C616

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355TASGene Ontologyregulation of transcription, DNA-dependent1
GO:0048440IGIGene Ontologycarpel development1
GO:0048481IGIUniProtovule development1 2 3 4 5 6 7
GO:0009944IGIUniProtpolarity specification of adaxial/abaxial axis1 2 3 4 5 6 7
GO:0009737RCAGene Ontologyresponse to abscisic acid1
GO:0009793RCAGene Ontologyembryo development ending in seed dormancy1
GO:0009845RCAGene Ontologyseed germination1
GO:0010162RCAGene Ontologyseed dormancy process1
GO:0030154IEAUniProtcell differentiation1 2 3 4 5 6
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7
GO:0003682IEAUniProtchromatin binding1 2 3 4 5 6
GO:0005488IEAPLAZA HomologybindingHOM03D000096
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000096
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000096
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000096

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6 7

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009057Homeodomain-like
IPR001005SANT/Myb domain
IPR006447Myb domain, plants

Mapman id Description
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_284KAN2;KAN3;KAN;KAN4Not available181 genes in 10 species

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DatabaseType
PlnTFDBG2-like
PlantTFDBG2-like