Gene: AT1G29900 (Arabidopsis thaliana)

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Gene Identifier
AT1G29900
Transcript Identifier
AT1G29900.1
Gene Type
Coding gene
Location
1 : 10468164-10471976 : positive

Family

Gene family
HOM03D005027
(41 genes in 29 species)
specific family
Subfamily
ORTHO03D009339
(28 genes in 25 species)
specific family

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Descriptions

Description
carbamoyl phosphate synthetase B
Curated Summary
Encodes carbamoyl phosphate synthetase (CPS) large subunit (CARB), also named as VEN3. Heterologous expression of the Arabidopsis VEN3 and VEN6 genes in a CPS-deficient Escherichia coli strain fully restored bacterial growth in minimal medium, demonstrating the enzymatic activity of the VEN3 and VEN6 proteins.
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Identifiers

Identifier Name
aliasVEN3
aliasVENOSA 3
aliascarbamoyl phosphate synthetase B
aliasCARB
uniprotQ42601

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016036IEPUniProtcellular response to phosphate starvation1 2 3 4 5
GO:0006526NASUniProtarginine biosynthetic process1 2 3 4 5
GO:0006094RCAGene Ontologygluconeogenesis1
GO:0006342RCAGene Ontologychromatin silencing1
GO:0007010RCAGene Ontologycytoskeleton organization1
GO:0010498RCAGene Ontologyproteasomal protein catabolic process1
GO:0051567RCAGene Ontologyhistone H3-K9 methylation1
GO:0006807IEAInterPronitrogen compound metabolic process
GO:0008152IEAInterPrometabolic process
GO:0044205IEAUniProt'de novo' UMP biosynthetic process1 2 3 4

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEA, ISSUniProtATP binding1 2 3 4 5
GO:0004088IDAUniProtcarbamoyl-phosphate synthase (glutamine-hydrolyzing) activity1 2 3 4 5
GO:0003824IEAInterProcatalytic activity
GO:0046872IEAUniProtmetal ion binding1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISMGene Ontologymitochondrion1
GO:0009507IDAGene Ontologychloroplast1
GO:0009570IDAUniProtchloroplast stroma1 2 3 4 5
GO:0016020IDAUniProtmembrane1 2 3 4 5
GO:0005829RCAGene Ontologycytosol1
GO:0005951IDAUniProtcarbamoyl-phosphate synthase complex1 2 3 4 5

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005480Carbamoyl-phosphate synthetase, large subunit oligomerisation domain
IPR016185Pre-ATP-grasp domain
IPR011607Methylglyoxal synthase-like domain
IPR005479Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
IPR005483Carbamoyl-phosphate synthase large subunit, CPSase domain
IPR011761ATP-grasp fold
IPR013816ATP-grasp fold, subdomain 2
IPR006275Carbamoyl-phosphate synthase, large subunit
IPR013815ATP-grasp fold, subdomain 1
IPR005481Carbamoyl-phosphate synthase, large subunit, N-terminal

Mapman id Description
23.1.1.1nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase
No SignalP domains detected for this gene.