Gene: AT1G27900 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G27900
Transcript Identifier
AT1G27900.1
Gene Type
Coding gene
Location
1 : 9715615-9720346 : negative

Family

Gene family
HOM03D000135
(738 genes in 31 species)
specific family
Subfamily
ORTHO03D000040
(252 genes in 31 species)
specific family

Loading...please wait

Descriptions

Description
RNA helicase family protein
Show more...

Identifiers

Identifier Name

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006310RCAGene OntologyDNA recombination1
GO:0007062RCAGene Ontologysister chromatid cohesion1
GO:0007126RCAGene Ontologymeiosis1
GO:0007131RCAGene Ontologyreciprocal meiotic recombination1
GO:0010332RCAGene Ontologyresponse to gamma radiation1
GO:0010413RCAGene Ontologyglucuronoxylan metabolic process1
GO:0032204RCAGene Ontologyregulation of telomere maintenance1
GO:0033044RCAGene Ontologyregulation of chromosome organization1
GO:0042138RCAGene Ontologymeiotic DNA double-strand break formation1
GO:0043247RCAGene Ontologytelomere maintenance in response to DNA damage1
GO:0045132RCAGene Ontologymeiotic chromosome segregation1
GO:0045492RCAGene Ontologyxylan biosynthetic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004004ISSGene OntologyATP-dependent RNA helicase activity1
GO:0008026IEAInterProATP-dependent helicase activity
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0000166IEAInterPronucleotide binding
GO:0004386IEAInterProhelicase activity
GO:0003676IEAInterPronucleic acid binding
GO:0005524IEAInterProATP binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000135
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000135
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000135
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03D000135
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000135
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000135
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000135
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000135
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000135
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000135
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000135
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000135
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000135
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000135
GO:0016887IEAPLAZA HomologyATPase activityHOM03D000135
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000135
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000135
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000135
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000135
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000135
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03D000135

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR011709Domain of unknown function DUF1605
IPR001650Helicase, C-terminal
IPR007502Helicase-associated domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003593AAA+ ATPase domain
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

Mapman id Description
27.1.2RNA.processing.RNA helicase
No SignalP domains detected for this gene.