Gene: AT1G22760 (Arabidopsis thaliana)

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Gene Identifier
AT1G22760
Transcript Identifier
AT1G22760.1
Gene Type
Coding gene
Location
1 : 8055599-8058799 : positive

Family

Gene family
HOM03D000173
(589 genes in 31 species)
specific family
Subfamily
ORTHO03D000175
(137 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
poly(A) binding protein 3
Curated Summary
Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.
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Identifiers

Identifier Name
aliasPAB3
aliaspoly(A) binding protein 3
uniprotO64380

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006397IGIUniProtmRNA processing1 2 3 4 5 6 7 8 9 10
GO:0060211IDAUniProtregulation of nuclear-transcribed mRNA poly(A) tail shortening1 2 3 4 5 6 7 8 9 10
GO:0000184IEAUniProtnuclear-transcribed mRNA catabolic process, nonsense-mediated decay1 2 3 4 5 6 7 8 9
GO:0006417IEAUniProtregulation of translation1 2 3 4 5 6 7 8 9
GO:0006413ISOPLAZA Tree-based Orthologytranslational initiationAT1G71770

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEA, ISSUniProtRNA binding1 2 3 4 5 6 7 8 9 10
GO:0003743ISSGene Ontologytranslation initiation factor activity1
GO:0000166IEAUniProtnucleotide binding1 2 3 4 5 6 7 8 9
GO:0003676IEAInterPronucleic acid binding
GO:0008143ISOPLAZA Tree-based Orthologypoly(A) RNA bindingAT1G71770
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000173
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000173
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000173
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000173

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAUniProtcytoplasm1 2 3 4 5 6 7 8 9
GO:0005634IEAUniProtnucleus1 2 3 4 5 6 7 8 9
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT1G71770

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006515Polyadenylate binding protein, human types 1, 2, 3, 4
IPR012677Nucleotide-binding, alpha-beta plait
IPR000504RNA recognition motif domain
IPR002004Polyadenylate-binding protein/Hyperplastic disc protein
IPR003954RNA recognition motif domain, eukaryote

Mapman id Description
27.1RNA.processing
No SignalP domains detected for this gene.