Gene: AT1G17520 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G17520
Transcript Identifier
AT1G17520.1
Gene Type
Coding gene
Location
1 : 6024959-6027224 : negative

Family

Gene family
HOM03D000881
(164 genes in 31 species)
specific family
Subfamily
ORTHO03D006877
(32 genes in 24 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Homeodomain-like/winged-helix DNA-binding family protein
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Identifiers

Identifier Name
uniprotF4I7L1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009651IEPUniProtresponse to salt stress1 2 3 4 5 6
GO:0009723IEPUniProtresponse to ethylene1 2 3 4 5 6
GO:0009733IEPUniProtresponse to auxin1 2 3 4 5 6
GO:0009751IEPUniProtresponse to salicylic acid1 2 3 4 5 6
GO:0009753IEPUniProtresponse to jasmonic acid1 2 3 4 5 6
GO:0046686IEPUniProtresponse to cadmium ion1 2 3 4 5 6
GO:0000956RCAGene Ontologynuclear-transcribed mRNA catabolic process1
GO:0006334IEAUniProtnucleosome assembly1 2 3 4 5
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03D000881

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6
GO:0003682IEAUniProtchromatin binding1 2 3 4 5

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6
GO:0000786IEAUniProtnucleosome1 2 3 4 5
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03D000881

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005818Linker histone H1/H5, domain H15
IPR009057Homeodomain-like
IPR011991Winged helix-turn-helix DNA-binding domain
IPR001005SANT/Myb domain
IPR017930Myb domain

Mapman id Description
27.3.26RNA.regulation of transcription.MYB-related transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMYB-related
PlantTFDBMYB_related