Gene: AT1G17020 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G17020
Transcript Identifier
AT1G17020.1
Gene Type
Coding gene
Location
1 : 5820258-5821741 : positive

Family

Gene family
HOM03D000012
(2924 genes in 31 species)
specific family
Subfamily
ORTHO03D014404
(14 genes in 6 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
senescence-related gene 1
Curated Summary
Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.
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Identifiers

Identifier Name
aliasSENESCENCE-RELATED GENE 1
aliasSRG1
aliasATSRG1
aliassenescence-related gene 1
uniprotQ39224

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009813ISSGene Ontologyflavonoid biosynthetic process1
GO:0009737RCAGene Ontologyresponse to abscisic acid1
GO:0009793RCAGene Ontologyembryo development ending in seed dormancy1
GO:0009830RCAGene Ontologycell wall modification involved in abscission1
GO:0009845RCAGene Ontologyseed germination1
GO:0010162RCAGene Ontologyseed dormancy process1
GO:0010260IEP, RCA, UniProtorgan senescence1 2 3 4 5 6
GO:0055114IEAInterProoxidation-reduction process
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000012
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000012
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000012

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016706IEA, ISSUniProtoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1 2 3 4 5
GO:0016682ISSUniProtoxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor1 2 3 4 5
GO:0016491IEAInterProoxidoreductase activity
GO:0046872IEAUniProtmetal ion binding1 2 3 4
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03D000012
GO:0016705IEAPLAZA Homologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenHOM03D000012
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000012

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027443Isopenicillin N synthase-like
IPR026992Non-haem dioxygenase N-terminal domain
IPR005123Oxoglutarate/iron-dependent dioxygenase

Mapman id Description
16.8.4secondary metabolism.flavonoids.flavonols
No SignalP domains detected for this gene.