Gene: AT1G15360 (Arabidopsis thaliana)

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Gene Identifier
AT1G15360
Transcript Identifier
AT1G15360.1
Gene Type
Coding gene
Location
1 : 5283609-5284506 : positive

Family

Gene family
HOM03D000011
(2954 genes in 31 species)
specific family
Subfamily
ORTHO03D017746
(9 genes in 9 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Integrase-type DNA-binding superfamily protein
Curated Summary
Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2.
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Identifiers

Identifier Name
aliasSHN1
aliasWAX INDUCER 1
aliasSHINE 1
aliasWIN1
uniprotQ9XI33

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISS, IEAGene Ontologyregulation of transcription, DNA-dependent1
GO:0009414IMPUniProtresponse to water deprivation1 2 3 4 5 6 7
GO:0010166IMPUniProtwax metabolic process1 2 3 4 5 6 7
GO:0010143IMPUniProtcutin biosynthetic process1 2 3 4 5 6 7
GO:0009873TASUniProtethylene mediated signaling pathway1 2 3 4 5 6 7
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000011
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000011
GO:0010467IEAPLAZA Homologygene expressionHOM03D000011
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000011
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000011
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000011
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000011
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000011
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000011
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000011
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000011
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000011
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000011
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000011
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000011
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000011
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000011
GO:0009987IEAPLAZA Homologycellular processHOM03D000011
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000011
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000011
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000011
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000011
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000011
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000011
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000011
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000011
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000011
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000011
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000011
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000011
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000011
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03D000011
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000011
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000011
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000011
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000011
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000011
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000011
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000011
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000011
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000011
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000011
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000011

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISS, IEAGene OntologyDNA binding1
GO:0003700IDA, ISS, TASIEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9
GO:0043565IPIUniProtsequence-specific DNA binding1 2 3 4 5 6 7
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000011
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000011
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000011
GO:0005488IEAPLAZA HomologybindingHOM03D000011
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03D000011

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISM, ISSUniProtnucleus1 2 3 4 5 6 7 8

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001471AP2/ERF domain
IPR016177DNA-binding domain

Mapman id Description
17.5.2hormone metabolism.ethylene.signal transduction
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_57WIN1;SHN3;SHN2Not available3789 genes in 10 species

View full overview
DatabaseType
PlnTFDBAP2-EREBP
PlantTFDBERF