Gene: AT1G14790 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G14790
Transcript Identifier
AT1G14790.1
Gene Type
Coding gene
Location
1 : 5094317-5097817 : negative

Family

Gene family
HOM03D000791
(177 genes in 29 species)
specific family
Subfamily
ORTHO03D000412
(90 genes in 29 species)
specific family

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Descriptions

Description
RNA-dependent RNA polymerase 1
Curated Summary
Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs.
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Identifiers

Identifier Name
aliasRNA-dependent RNA polymerase 1
aliasRDR1
aliasATRDRP1
aliasAtRDR1
uniprotQ9LQV2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016441ISSGene Ontologyposttranscriptional gene silencing1
GO:0009615IMPUniProtresponse to virus1 2 3 4 5 6 7
GO:0009751IEPUniProtresponse to salicylic acid1 2 3 4 5 6 7
GO:0060148IMPUniProtpositive regulation of posttranscriptional gene silencing1 2 3 4 5 6 7
GO:0000165RCAGene OntologyMAPK cascade1
GO:0006355RCAGene Ontologyregulation of transcription, DNA-dependent1
GO:0006612RCAGene Ontologyprotein targeting to membrane1
GO:0009617RCAGene Ontologyresponse to bacterium1
GO:0009862RCAGene Ontologysystemic acquired resistance, salicylic acid mediated signaling pathway1
GO:0009867RCAGene Ontologyjasmonic acid mediated signaling pathway1
GO:0010310RCAGene Ontologyregulation of hydrogen peroxide metabolic process1
GO:0010363RCAGene Ontologyregulation of plant-type hypersensitive response1
GO:0031348RCAGene Ontologynegative regulation of defense response1
GO:0035304RCAGene Ontologyregulation of protein dephosphorylation1
GO:0010025IGIUniProtwax biosynthetic process1 2 3 4 5 6 7
GO:0006952IEAUniProtdefense response1 2 3 4 5 6
GO:0031047IEAUniProtgene silencing by RNA1 2 3 4 5 6

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676ISSGene Ontologynucleic acid binding1
GO:0003968IEA, ISSUniProtRNA-directed RNA polymerase activity1 2 3 4 5 6 7
GO:0000166IEAInterPronucleotide binding
GO:0003723IEAUniProtRNA binding1 2 3 4 5 6
GO:0034062IEAPLAZA HomologyRNA polymerase activityHOM03D000791
GO:0016779IEAPLAZA Homologynucleotidyltransferase activityHOM03D000791

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007855RNA-dependent RNA polymerase, eukaryotic-type
IPR012677Nucleotide-binding, alpha-beta plait

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.