Gene: AT1G10970 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G10970
Transcript Identifier
AT1G10970.1
Gene Type
Coding gene
Location
1 : 3665201-3666933 : negative

Family

Gene family
HOM03D000308
(378 genes in 30 species)
specific family
Subfamily
ORTHO03D003830
(37 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
zinc transporter 4 precursor
Curated Summary
A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root and shoot. Expression is regulated by copper, but response to copper deficiency is detected only after three weeks of deficiency.
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Identifiers

Identifier Name
aliaszinc transporter 4 precursor
aliasZIP4
aliasATZIP4
uniprotO04089

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006812ISSGene Ontologycation transport1
GO:0071577IEAInterProzinc ion transmembrane transport
GO:0055085IEAInterProtransmembrane transport
GO:0030001IEAInterPrometal ion transport
GO:0006829ISOPLAZA Tree-based Orthologyzinc ion transportAT1G60960
GO:0006826ISOPLAZA Tree-based Orthologyiron ion transportAT1G60960
GO:0009624ISOPLAZA Tree-based Orthologyresponse to nematodeAT1G60960
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03D000308
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000308
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000308
GO:0034220IEAPLAZA Homologyion transmembrane transportHOM03D000308
GO:0000041IEAPLAZA Homologytransition metal ion transportHOM03D000308
GO:0006810IEAPLAZA HomologytransportHOM03D000308
GO:0006811IEAPLAZA Homologyion transportHOM03D000308
GO:0051179IEAPLAZA HomologylocalizationHOM03D000308

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008324ISSGene Ontologycation transmembrane transporter activity1
GO:0005375IGIGene Ontologycopper ion transmembrane transporter activity1
GO:0005385IEA, IMPUniProtzinc ion transmembrane transporter activity1 2 3 4
GO:0005515IPIGene Ontologyprotein binding1
GO:0046873IEAInterPrometal ion transmembrane transporter activity
GO:0005381ISOPLAZA Tree-based Orthologyiron ion transmembrane transporter activityAT1G60960
GO:0005215IEAPLAZA Homologytransporter activityHOM03D000308
GO:0015075IEAPLAZA Homologyion transmembrane transporter activityHOM03D000308
GO:0046915IEAPLAZA Homologytransition metal ion transmembrane transporter activityHOM03D000308
GO:0022890IEAPLAZA Homologyinorganic cation transmembrane transporter activityHOM03D000308
GO:0022891IEAPLAZA Homologysubstrate-specific transmembrane transporter activityHOM03D000308
GO:0022892IEAPLAZA Homologysubstrate-specific transporter activityHOM03D000308
GO:0072509IEAPLAZA Homologydivalent inorganic cation transmembrane transporter activityHOM03D000308
GO:0022857IEAPLAZA Homologytransmembrane transporter activityHOM03D000308

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISM, ISSGene Ontologychloroplast1 2
GO:0016020IEAInterPromembrane
GO:0016021IEAUniProtintegral to membrane1 2 3
GO:0009535IEAUniProtchloroplast thylakoid membrane1 2 3
GO:0005886ISOPLAZA Tree-based Orthologyplasma membraneAT1G60960
GO:0005774ISOPLAZA Tree-based Orthologyvacuolar membraneAT1G60960
GO:0031224IEAPLAZA Homologyintrinsic to membraneHOM03D000308
GO:0044425IEAPLAZA Homologymembrane partHOM03D000308

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004698Zinc/iron permease, fungal/plant
IPR003689Zinc/iron permease

Mapman id Description
34.12transport.metal
No SignalP domains detected for this gene.