Gene: AT1G10480 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G10480
Transcript Identifier
AT1G10480.1
Gene Type
Coding gene
Location
1 : 3449734-3450369 : positive

Family

Gene family
HOM03D000162
(626 genes in 29 species)
specific family
Subfamily
ORTHO03D022793
(6 genes in 5 species)
specific family

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Descriptions

Description
zinc finger protein 5
Curated Summary
Encodes a zinc finger protein containing only a single zinc finger that acts downstream of ZFP6 in regulating trichome development by integrating GA and cytokinin signaling.
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Identifiers

Identifier Name
aliaszinc finger protein 5
aliasZFP5
uniprotQ39264

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355TASGene Ontologyregulation of transcription, DNA-dependent1
GO:0009740IMPUniProtgibberellic acid mediated signaling pathway1 2 3
GO:0010026IMP, IGIUniProttrichome differentiation1 2 3 4
GO:0048510IMPUniProtregulation of timing of transition from vegetative to reproductive phase1 2 3
GO:0010089RCAGene Ontologyxylem development1
GO:0044036RCAGene Ontologycell wall macromolecule metabolic process1
GO:0009736IMPUniProtcytokinin-activated signaling pathway1 2 3

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEA, ISSUniProtnucleic acid binding1 2 3
GO:0008270ISSGene Ontologyzinc ion binding1
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3
GO:0046872IEAUniProtmetal ion binding1 2
GO:0043169IEAPLAZA Homologycation bindingHOM03D000162
GO:0043167IEAPLAZA Homologyion bindingHOM03D000162

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007087Zinc finger, C2H2
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain

Mapman id Description
27.3.11RNA.regulation of transcription.C2H2 zinc finger family
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_248ZFP5Not available28 genes in 2 species

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DatabaseType
PlnTFDBC2H2
PlantTFDBC2H2