Gene: AT1G04220 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G04220
Transcript Identifier
AT1G04220.1
Gene Type
Coding gene
Location
1 : 1119853-1122483 : negative

Family

Gene family
HOM03D000145
(721 genes in 30 species)
specific family
Subfamily
ORTHO03D060585
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
3-ketoacyl-CoA synthase 2
Curated Summary
Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
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Identifiers

Identifier Name
aliasKCS2
alias3-ketoacyl-CoA synthase 2
uniprotQ5XEP9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006970IEPUniProtresponse to osmotic stress1 2 3 4 5
GO:0009611IEPUniProtresponse to wounding1 2 3 4 5
GO:0010345IMPUniProtsuberin biosynthetic process1 2 3 4 5
GO:0000038RCAGene Ontologyvery long-chain fatty acid metabolic process1
GO:0009409RCAGene Ontologyresponse to cold1
GO:0009411RCAGene Ontologyresponse to UV1
GO:0009813RCAGene Ontologyflavonoid biosynthetic process1
GO:0042335RCAGene Ontologycuticle development1
GO:0008610IEAInterProlipid biosynthetic process
GO:0008152IEAInterPrometabolic process
GO:0006633IEAUniProtfatty acid biosynthetic process1 2 3 4
GO:0006629IEAPLAZA Homologylipid metabolic processHOM03D000145
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000145
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000145
GO:0044283IEAPLAZA Homologysmall molecule biosynthetic processHOM03D000145
GO:0043436IEAPLAZA Homologyoxoacid metabolic processHOM03D000145
GO:0044281IEAPLAZA Homologysmall molecule metabolic processHOM03D000145
GO:0032787IEAPLAZA Homologymonocarboxylic acid metabolic processHOM03D000145
GO:0016053IEAPLAZA Homologyorganic acid biosynthetic processHOM03D000145
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000145
GO:0044711IEAPLAZA Homologysingle-organism biosynthetic processHOM03D000145
GO:0006631IEAPLAZA Homologyfatty acid metabolic processHOM03D000145
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000145
GO:0044255IEAPLAZA Homologycellular lipid metabolic processHOM03D000145
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000145
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000145
GO:0009987IEAPLAZA Homologycellular processHOM03D000145
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000145
GO:0006082IEAPLAZA Homologyorganic acid metabolic processHOM03D000145
GO:0072330IEAPLAZA Homologymonocarboxylic acid biosynthetic processHOM03D000145
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000145
GO:0046394IEAPLAZA Homologycarboxylic acid biosynthetic processHOM03D000145
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000145
GO:0019752IEAPLAZA Homologycarboxylic acid metabolic processHOM03D000145

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0009922IDAUniProtfatty acid elongase activity1 2 3 4 5
GO:0016747IEAInterProtransferase activity, transferring acyl groups other than amino-acyl groups
GO:0003824IEAInterProcatalytic activity
GO:0016746IEAPLAZA Homologytransferase activity, transferring acyl groupsHOM03D000145
GO:0016740IEAPLAZA Homologytransferase activityHOM03D000145

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0016020IEAInterPromembrane
GO:0016021IEAUniProtintegral to membrane1 2 3 4

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR0137473-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal
IPR016039Thiolase-like
IPR016038Thiolase-like, subgroup
IPR013601FAE1/Type III polyketide synthase-like protein

Mapman id Description
11.1.10lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase
No SignalP domains detected for this gene.