Gene: AL8G31990 (Arabidopsis lyrata)

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Gene Identifier
AL8G31990
Transcript Identifier
AL8G31990.1
Gene Type
Coding gene
Location
scaffold_8 : 21820758-21822409 : negative

Family

Gene family
HOM03D000061
(1331 genes in 31 species)
specific family
Subfamily
ORTHO03D011366
(23 genes in 18 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
U-box domain-containing protein 38
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid496745
GeneNameg496745
idPAC:16065018

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567IEAGenome Projectprotein ubiquitination
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000061
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000061
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000061
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000061
GO:0009987IEAPLAZA Homologycellular processHOM03D000061
GO:0032446IEAPLAZA Homologyprotein modification by small protein conjugationHOM03D000061
GO:0070647IEAPLAZA Homologyprotein modification by small protein conjugation or removalHOM03D000061
GO:0043412IEAPLAZA Homologymacromolecule modificationHOM03D000061
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000061
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D000061
GO:0006464IEAPLAZA Homologycellular protein modification processHOM03D000061
GO:0036211IEAPLAZA Homologyprotein modification processHOM03D000061
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000061

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0004842IEAGenome Projectubiquitin-protein ligase activity
GO:0005488IEAInterProbinding
GO:0070696ISOPLAZA Integrative Orthologytransmembrane receptor protein serine/threonine kinase bindingAT5G65200
GO:0016874IEAPLAZA Homologyligase activityHOM03D000061
GO:0019787IEAPLAZA Homologysmall conjugating protein ligase activityHOM03D000061
GO:0016881IEAPLAZA Homologyacid-amino acid ligase activityHOM03D000061
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03D000061

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151IEAGenome Projectubiquitin ligase complex
GO:0005622IEAPLAZA HomologyintracellularHOM03D000061
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000061
GO:1902494IEAPLAZA Homologycatalytic complexHOM03D000061
GO:0005623IEAPLAZA HomologycellHOM03D000061
GO:0043234IEAPLAZA Homologyprotein complexHOM03D000061
GO:0044464IEAPLAZA Homologycell partHOM03D000061
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000061

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000225Armadillo
IPR003613U box domain
IPR016024Armadillo-type fold
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR011989Armadillo-like helical

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.