PLAZA 3.0 Dicots gene overview : AL8G26410

Gene: AL8G26410 (Arabidopsis lyrata)

Overview

Gene Identifier: AL8G26410
Transcript Identifier: AL8G26410.1
Gene Type: Coding gene
Location: scaffold_8 : 19443745-19448196 : positive

Family

Gene family: HOM03D002048
(83 genes in 29 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): CCR4-NOT transcription complex subunit 4

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	358235
GeneName	g358235
id	PAC:16059111

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003676	IEA	Genome Project	nucleic acid binding
GO:0005515	IEA	InterPro	protein binding
GO:0000166	IEA	InterPro	nucleotide binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03D002048

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009506	ISO	PLAZA Tree-based Orthology	plasmodesma	AT3G45630

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001841	Zinc finger, RING-type
IPR003954	RNA recognition motif domain, eukaryote
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding, alpha-beta plait
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
27.3.67	RNA.regulation of transcription.putative transcription regulator

No SignalP domains detected for this gene.