Gene: AL8G25540 (Arabidopsis lyrata)

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Gene Identifier
AL8G25540
Transcript Identifier
AL8G25540.1
Gene Type
Coding gene
Location
scaffold_8 : 19110111-19111402 : positive

Family

Gene family
HOM03D004475
(44 genes in 23 species)
specific family
Subfamily
ORTHO03D010934
(24 genes in 20 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
CpG-binding domain-containing protein 6
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid950681
GeneNameg950681
idPAC:16056210

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0051747ISOPLAZA Integrative Orthologycytosine C-5 DNA demethylase activityAT5G59380
GO:0043621ISOPLAZA Integrative Orthologyprotein self-associationAT3G46580 AT5G59380
GO:0019899ISOPLAZA Integrative Orthologyenzyme bindingAT3G46580 AT5G59380
GO:0008327ISOPLAZA Integrative Orthologymethyl-CpG bindingAT3G46580 AT5G59380
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G59380

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0005731ISOPLAZA Integrative Orthologynucleolus organizer regionAT5G59380
GO:0010370ISOPLAZA Integrative Orthologyperinucleolar chromocenterAT3G46580 AT5G59380
GO:0005720ISOPLAZA Integrative Orthologynuclear heterochromatinAT3G46580 AT5G59380

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001739Methyl-CpG DNA binding
IPR016177DNA-binding domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.