PLAZA 3.0 Dicots gene overview : AL8G24150

Gene: AL8G24150 (Arabidopsis lyrata)

Overview

Gene Identifier: AL8G24150
Transcript Identifier: AL8G24150.1
Gene Type: Coding gene
Location: scaffold_8 : 18524807-18527144 : negative

Family

Gene family: HOM03D001050
(143 genes in 31 species)
specific family
Subfamily: ORTHO03D005937
(33 genes in 27 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine): Malate dehydrogenase [NADP], chloroplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	495948
GeneName	g495948
id	PAC:16039359

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0055114	IEA	Genome Project	oxidation-reduction process
GO:0006108	IEA	Genome Project	malate metabolic process
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0043648	IEA	PLAZA Homology	dicarboxylic acid metabolic process	HOM03D001050

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016491	IEA	Genome Project	oxidoreductase activity
GO:0016616	IEA	Genome Project	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016615	IEA	Genome Project	malate dehydrogenase activity
GO:0046554	IEA	InterPro	malate dehydrogenase (NADP+) activity
GO:0003824	IEA	InterPro	catalytic activity
GO:0030060	IEA	PLAZA Homology	L-malate dehydrogenase activity	HOM03D001050

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT5G58330
GO:0048046	ISO	PLAZA Integrative Orthology	apoplast	AT5G58330
GO:0009579	ISO	PLAZA Integrative Orthology	thylakoid	AT5G58330
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT5G58330
GO:0009941	ISO	PLAZA Integrative Orthology	chloroplast envelope	AT5G58330
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT5G58330

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001236	Lactate/malate dehydrogenase, N-terminal
IPR010945	Malate dehydrogenase, type 2
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR022383	Lactate/malate dehydrogenase, C-terminal
IPR001252	Malate dehydrogenase, active site
IPR011273	Malate dehydrogenase, NADP-dependent, plants
IPR016040	NAD(P)-binding domain

Mapman id	Description
8.2.9	TCA / org transformation.other organic acid transformatons.cyt MDH

No SignalP domains detected for this gene.