Gene: AL8G03940 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL8G03940
Transcript Identifier
AL8G03940.1
Gene Type
Coding gene
Location
scaffold_8 : 2517420-2518968 : positive

Family

Gene family
HOM03D000308
(378 genes in 30 species)
specific family
Subfamily
ORTHO03D001834
(46 genes in 26 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
transport protein 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid330886
GeneNameg330886
idPAC:16058500

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030001IEAGenome Projectmetal ion transport
GO:0055085IEAGenome Projecttransmembrane transport
GO:0071577IEAInterProzinc ion transmembrane transport
GO:0006826ISOPLAZA Integrative Orthologyiron ion transportSL02G069200 SL02G069190 AT4G19690 AT4G19680
GO:0015675ISOPLAZA Tree-based Orthologynickel cation transportAT4G19690
GO:0071732ISOPLAZA Tree-based Orthologycellular response to nitric oxideAT4G19690
GO:0071369ISOPLAZA Tree-based Orthologycellular response to ethylene stimulusAT4G19690
GO:0071281ISOPLAZA Tree-based Orthologycellular response to iron ionAT4G19690
GO:0009617ISOPLAZA Tree-based Orthologyresponse to bacteriumAT4G19690
GO:0006879ISOPLAZA Tree-based Orthologycellular iron ion homeostasisAT4G19690
GO:0015691ISOPLAZA Tree-based Orthologycadmium ion transportAT4G19690
GO:0006829ISOPLAZA Tree-based Orthologyzinc ion transportAT4G19690 AT4G19680
GO:0006828ISOPLAZA Tree-based Orthologymanganese ion transportAT4G19690
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03D000308
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000308
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000308
GO:0034220IEAPLAZA Homologyion transmembrane transportHOM03D000308
GO:0000041IEAPLAZA Homologytransition metal ion transportHOM03D000308
GO:0006810IEAPLAZA HomologytransportHOM03D000308
GO:0006812IEAPLAZA Homologycation transportHOM03D000308
GO:0006811IEAPLAZA Homologyion transportHOM03D000308
GO:0051179IEAPLAZA HomologylocalizationHOM03D000308

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046873IEAGenome Projectmetal ion transmembrane transporter activity
GO:0005385IEAInterProzinc ion transmembrane transporter activity
GO:0005381ISOPLAZA Integrative Orthologyiron ion transmembrane transporter activitySL02G069200 AT4G19690 AT4G19680
GO:0015088ISOPLAZA Tree-based Orthologycopper uptake transmembrane transporter activityAT4G19690
GO:0015086ISOPLAZA Tree-based Orthologycadmium ion transmembrane transporter activityAT4G19690
GO:0005384ISOPLAZA Tree-based Orthologymanganese ion transmembrane transporter activityAT4G19690
GO:0005215IEAPLAZA Homologytransporter activityHOM03D000308
GO:0015075IEAPLAZA Homologyion transmembrane transporter activityHOM03D000308
GO:0008324IEAPLAZA Homologycation transmembrane transporter activityHOM03D000308
GO:0046915IEAPLAZA Homologytransition metal ion transmembrane transporter activityHOM03D000308
GO:0022890IEAPLAZA Homologyinorganic cation transmembrane transporter activityHOM03D000308
GO:0022891IEAPLAZA Homologysubstrate-specific transmembrane transporter activityHOM03D000308
GO:0022892IEAPLAZA Homologysubstrate-specific transporter activityHOM03D000308
GO:0072509IEAPLAZA Homologydivalent inorganic cation transmembrane transporter activityHOM03D000308
GO:0022857IEAPLAZA Homologytransmembrane transporter activityHOM03D000308

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0016021IEAInterProintegral to membrane
GO:0005886ISOPLAZA Tree-based Orthologyplasma membraneAT4G19690
GO:0005802ISOPLAZA Tree-based Orthologytrans-Golgi networkAT4G19690
GO:0031224IEAPLAZA Homologyintrinsic to membraneHOM03D000308
GO:0044425IEAPLAZA Homologymembrane partHOM03D000308

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003689Zinc/iron permease
IPR004698Zinc/iron permease, fungal/plant

Mapman id Description
34.12transport.metal
SignalP Description
SignalP-TMSignal Peptide detected using TM network