Gene: AL7G22600 (Arabidopsis lyrata)
Overview 
- Gene Identifier
- AL7G22600
- Transcript Identifier
- AL7G22600.1
- Gene Type
- Coding gene
- Location
- scaffold_7 : 9921759-9925110 : positive
Family
- Gene family
- Subfamily
- Duplication type
- Tandem duplicate
Descriptions
- Description (AnnoMine)
-
Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
pid | 946185 |
GeneName | g946185 |
id | PAC:16039103 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006915 | IEA | Genome Project | apoptotic process | |
GO:0006952 | IEA | InterPro | defense response | |
GO:0051716 | IEA | PLAZA Homology | cellular response to stimulus | HOM03D000005 |
GO:0044763 | IEA | PLAZA Homology | single-organism cellular process | HOM03D000005 |
GO:0007154 | IEA | PLAZA Homology | cell communication | HOM03D000005 |
GO:0050789 | IEA | PLAZA Homology | regulation of biological process | HOM03D000005 |
GO:0009987 | IEA | PLAZA Homology | cellular process | HOM03D000005 |
GO:0023052 | IEA | PLAZA Homology | signaling | HOM03D000005 |
GO:0044699 | IEA | PLAZA Homology | single-organism process | HOM03D000005 |
GO:0006950 | IEA | PLAZA Homology | response to stress | HOM03D000005 |
GO:0065007 | IEA | PLAZA Homology | biological regulation | HOM03D000005 |
GO:0007165 | IEA | PLAZA Homology | signal transduction | HOM03D000005 |
GO:0050794 | IEA | PLAZA Homology | regulation of cellular process | HOM03D000005 |
GO:0044700 | IEA | PLAZA Homology | single organism signaling | HOM03D000005 |
GO:0050896 | IEA | PLAZA Homology | response to stimulus | HOM03D000005 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | IEA | Genome Project | protein binding | |
GO:0043531 | IEA | Genome Project | ADP binding | |
GO:0005524 | IEA | Genome Project | ATP binding | |
GO:0032555 | IEA | PLAZA Homology | purine ribonucleotide binding | HOM03D000005 |
GO:0043168 | IEA | PLAZA Homology | anion binding | HOM03D000005 |
GO:0032553 | IEA | PLAZA Homology | ribonucleotide binding | HOM03D000005 |
GO:0043167 | IEA | PLAZA Homology | ion binding | HOM03D000005 |
GO:0097367 | IEA | PLAZA Homology | carbohydrate derivative binding | HOM03D000005 |
GO:0032559 | IEA | PLAZA Homology | adenyl ribonucleotide binding | HOM03D000005 |
GO:1901265 | IEA | PLAZA Homology | nucleoside phosphate binding | HOM03D000005 |
GO:0000166 | IEA | PLAZA Homology | nucleotide binding | HOM03D000005 |
GO:0001882 | IEA | PLAZA Homology | nucleoside binding | HOM03D000005 |
GO:0030554 | IEA | PLAZA Homology | adenyl nucleotide binding | HOM03D000005 |
GO:0017076 | IEA | PLAZA Homology | purine nucleotide binding | HOM03D000005 |
GO:0097159 | IEA | PLAZA Homology | organic cyclic compound binding | HOM03D000005 |
GO:0036094 | IEA | PLAZA Homology | small molecule binding | HOM03D000005 |
GO:0032549 | IEA | PLAZA Homology | ribonucleoside binding | HOM03D000005 |
GO:0005488 | IEA | PLAZA Homology | binding | HOM03D000005 |
GO:1901363 | IEA | PLAZA Homology | heterocyclic compound binding | HOM03D000005 |
GO:0001883 | IEA | PLAZA Homology | purine nucleoside binding | HOM03D000005 |
GO:0032550 | IEA | PLAZA Homology | purine ribonucleoside binding | HOM03D000005 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.