PLAZA 3.0 Dicots gene overview : AL7G18740

Gene: AL7G18740 (Arabidopsis lyrata)

Overview

Gene Identifier: AL7G18740
Transcript Identifier: AL7G18740.1
Gene Type: Coding gene
Location: scaffold_7 : 8089179-8089935 : positive

Family

Gene family: HOM03D000861
(166 genes in 31 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): H2 finger protein

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	945769
GeneName	g945769
id	PAC:16057407

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0010729	ISO	PLAZA Integrative Orthology	positive regulation of hydrogen peroxide biosynthetic process	AT4G23450
GO:0009789	ISO	PLAZA Integrative Orthology	positive regulation of abscisic acid-activated signaling pathway	AT4G23450
GO:0009414	ISO	PLAZA Integrative Orthology	response to water deprivation	AT4G23450
GO:0009737	ISO	PLAZA Integrative Orthology	response to abscisic acid	AT4G23450

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein ligase activity	AT4G23450

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT4G23450

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001841	Zinc finger, RING-type
IPR013083	Zinc finger, RING/FYVE/PHD-type

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.