Gene: AL7G17030 (Arabidopsis lyrata)
Overview 
- Gene Identifier
- AL7G17030
- Transcript Identifier
- AL7G17030.1
- Gene Type
- Coding gene
- Location
- scaffold_7 : 7293806-7298739 : positive
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description (AnnoMine)
-
Probable respiratory burst oxidase homolog protein I
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
pid | 492327 |
GeneName | g492327 |
id | PAC:16061293 |
Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0055114 | IEA | Genome Project | oxidation-reduction process | |
GO:0033500 | ISO | PLAZA Tree-based Orthology | carbohydrate homeostasis | AT5G47910 |
GO:0007231 | ISO | PLAZA Tree-based Orthology | osmosensory signaling pathway | AT5G47910 |
GO:0009611 | ISO | PLAZA Tree-based Orthology | response to wounding | AT5G47910 |
GO:0050832 | ISO | PLAZA Tree-based Orthology | defense response to fungus | AT5G47910 |
GO:0043069 | ISO | PLAZA Tree-based Orthology | negative regulation of programmed cell death | AT5G47910 |
GO:0009408 | ISO | PLAZA Tree-based Orthology | response to heat | AT5G47910 |
GO:0072593 | ISO | PLAZA Tree-based Orthology | reactive oxygen species metabolic process | AT5G47910 |
GO:0033198 | ISO | PLAZA Tree-based Orthology | response to ATP | AT5G51060 |
GO:0010053 | ISO | PLAZA Tree-based Orthology | root epidermal cell differentiation | AT5G51060 |
GO:0009060 | ISO | PLAZA Tree-based Orthology | aerobic respiration | AT5G51060 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005506 | IEA | Genome Project | iron ion binding | |
GO:0009055 | IEA | Genome Project | electron carrier activity | |
GO:0016491 | IEA | Genome Project | oxidoreductase activity | |
GO:0050660 | IEA | Genome Project | flavin adenine dinucleotide binding | |
GO:0004601 | IEA | Genome Project | peroxidase activity | |
GO:0050664 | IEA | Genome Project | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | |
GO:0005509 | IEA | InterPro | calcium ion binding | |
GO:0016174 | ISO | PLAZA Tree-based Orthology | NAD(P)H oxidase activity | AT5G51060 AT5G47910 |
GO:0016209 | IEA | PLAZA Homology | antioxidant activity | HOM03D000413 |
GO:0016651 | IEA | PLAZA Homology | oxidoreductase activity, acting on NAD(P)H | HOM03D000413 |
GO:0016684 | IEA | PLAZA Homology | oxidoreductase activity, acting on peroxide as acceptor | HOM03D000413 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016021 | IEA | Genome Project | integral to membrane | |
GO:0016020 | IEA | InterPro | membrane | |
GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT4G25090 |
GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT4G25090 |
GO:0005794 | ISO | PLAZA Tree-based Orthology | Golgi apparatus | AT5G47910 |
GO:0005887 | ISO | PLAZA Tree-based Orthology | integral to plasma membrane | AT5G51060 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR000778 | Cytochrome b245, heavy chain |
IPR002048 | EF-hand domain |
IPR013112 | FAD-binding 8 |
IPR017938 | Riboflavin synthase-like beta-barrel |
IPR013121 | Ferric reductase, NAD binding |
IPR018247 | EF-Hand 1, calcium-binding site |
IPR013130 | Ferric reductase transmembrane component-like domain |
IPR013623 | NADPH oxidase Respiratory burst |
IPR017927 | Ferredoxin reductase-type FAD-binding domain |
IPR011992 | EF-hand domain pair |
Mapman id | Description |
---|---|
20.1.1 | stress.biotic.respiratory burst |
No SignalP domains detected for this gene.