PLAZA 3.0 Dicots gene overview : AL7G06770

Gene: AL7G06770 (Arabidopsis lyrata)

Overview

Gene Identifier: AL7G06770
Transcript Identifier: AL7G06770.1
Gene Type: Coding gene
Location: scaffold_7 : 2881195-2882869 : positive

Family

Gene family: HOM03D000203
(506 genes in 31 species)
specific family
Subfamily: ORTHO03D007929
(30 genes in 21 species)
specific family
Duplication type: Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine): Cinnamyl alcohol dehydrogenase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	944486
GeneName	g944486
id	PAC:16041501

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0055114	IEA	Genome Project	oxidation-reduction process
GO:0009809	ISO	PLAZA Integrative Orthology	lignin biosynthetic process	OS02G09490 AT4G34230 AT3G19450
GO:0080167	ISO	PLAZA Tree-based Orthology	response to karrikin	AT3G19450
GO:0044699	IEA	PLAZA Homology	single-organism process	HOM03D000203
GO:0044710	IEA	PLAZA Homology	single-organism metabolic process	HOM03D000203

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008270	IEA	Genome Project	zinc ion binding
GO:0016491	IEA	Genome Project	oxidoreductase activity
GO:0016747	IEA	InterPro	transferase activity, transferring acyl groups other than amino-acyl groups
GO:0045551	ISO	PLAZA Integrative Orthology	cinnamyl-alcohol dehydrogenase activity	OS02G09490 AT4G34230 AT3G19450
GO:0016746	IEA	PLAZA Homology	transferase activity, transferring acyl groups	HOM03D000203
GO:0043169	IEA	PLAZA Homology	cation binding	HOM03D000203
GO:0043167	IEA	PLAZA Homology	ion binding	HOM03D000203
GO:0046914	IEA	PLAZA Homology	transition metal ion binding	HOM03D000203
GO:0046872	IEA	PLAZA Homology	metal ion binding	HOM03D000203

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT4G34230

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013149	Alcohol dehydrogenase, C-terminal
IPR020843	Polyketide synthase, enoylreductase
IPR002328	Alcohol dehydrogenase, zinc-type, conserved site
IPR016040	NAD(P)-binding domain
IPR002085	Alcohol dehydrogenase superfamily, zinc-type
IPR013154	Alcohol dehydrogenase GroES-like
IPR011032	GroES (chaperonin 10)-like

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.