Gene: AL7G06280 (Arabidopsis lyrata)

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Gene Identifier
AL7G06280
Transcript Identifier
AL7G06280.1
Gene Type
Coding gene
Location
scaffold_7 : 2688171-2691285 : negative

Family

Gene family
HOM03D002838
(64 genes in 30 species)
specific family
Subfamily
ORTHO03D001490
(50 genes in 30 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Squalene synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid944434
GeneNameg944434
idPAC:16047145

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEAGenome Projectbiosynthetic process
GO:0008610IEAInterProlipid biosynthetic process
GO:0016126ISOPLAZA Integrative Orthologysterol biosynthetic processAT4G34640

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016740IEAGenome Projecttransferase activity
GO:0016765IEAInterProtransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0004310IEAInterProfarnesyl-diphosphate farnesyltransferase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAInterProintegral to membrane
GO:0005789ISOPLAZA Integrative Orthologyendoplasmic reticulum membraneAT4G34640
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G34640
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT4G34640

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008949Terpenoid synthase
IPR019845Squalene/phytoene synthase, conserved site
IPR006449Farnesyl-diphosphate farnesyltransferase
IPR002060Squalene/phytoene synthase

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.