Gene: AL6G39830 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL6G39830
Transcript Identifier
AL6G39830.1
Gene Type
Coding gene
Location
scaffold_6 : 24169932-24171025 : positive

Family

Gene family
HOM03D000239
(447 genes in 29 species)
specific family
Subfamily
ORTHO03D007522
(31 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Basic endochitinase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid943574
GeneNameg943574
idPAC:16063643

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006032IEAGenome Projectchitin catabolic process
GO:0016998IEAGenome Projectcell wall macromolecule catabolic process
GO:0050832ISOPLAZA Integrative Orthologydefense response to fungusAT4G01700 AT1G02360
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000239
GO:0006030IEAPLAZA Homologychitin metabolic processHOM03D000239
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000239
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000239
GO:0046348IEAPLAZA Homologyamino sugar catabolic processHOM03D000239
GO:0071554IEAPLAZA Homologycell wall organization or biogenesisHOM03D000239
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000239
GO:1901565IEAPLAZA Homologyorganonitrogen compound catabolic processHOM03D000239
GO:1901564IEAPLAZA Homologyorganonitrogen compound metabolic processHOM03D000239
GO:0044036IEAPLAZA Homologycell wall macromolecule metabolic processHOM03D000239
GO:0006040IEAPLAZA Homologyamino sugar metabolic processHOM03D000239
GO:0006026IEAPLAZA Homologyaminoglycan catabolic processHOM03D000239
GO:1901136IEAPLAZA Homologycarbohydrate derivative catabolic processHOM03D000239
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000239
GO:1901135IEAPLAZA Homologycarbohydrate derivative metabolic processHOM03D000239
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03D000239
GO:0006022IEAPLAZA Homologyaminoglycan metabolic processHOM03D000239
GO:1901072IEAPLAZA Homologyglucosamine-containing compound catabolic processHOM03D000239
GO:1901071IEAPLAZA Homologyglucosamine-containing compound metabolic processHOM03D000239
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000239

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004568IEAGenome Projectchitinase activity
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03D000239
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000239
GO:0008061IEAPLAZA Homologychitin bindingHOM03D000239
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000239

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618ISOPLAZA Integrative Orthologycell wallAT4G01700

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000726Glycoside hydrolase, family 19, catalytic
IPR023346Lysozyme-like domain

No MapMan annotations defined for this gene.
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network