Gene: AL6G27650 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL6G27650
Transcript Identifier
AL6G27650.1
Gene Type
Coding gene
Location
scaffold_6 : 12758350-12761274 : negative

Family

Gene family
HOM03D004639
(43 genes in 30 species)
specific family
Subfamily
ORTHO03D003885
(37 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
Cyclin-H1-1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid942336
GeneNameg942336
idPAC:16056130

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006413IEAGenome Projecttranslational initiation
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0000079IEAGenome Projectregulation of cyclin-dependent protein serine/threonine kinase activity
GO:0006351IEAInterProtranscription, DNA-templated
GO:2000070ISOPLAZA Integrative Orthologyregulation of response to water deprivationAT5G27620
GO:1990069ISOPLAZA Integrative Orthologystomatal openingAT5G27620
GO:0072593ISOPLAZA Integrative Orthologyreactive oxygen species metabolic processAT5G27620
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT5G27620
GO:0010119ISOPLAZA Integrative Orthologyregulation of stomatal movementAT5G27620
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D004639

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003743IEAGenome Projecttranslation initiation factor activity
GO:0019901IEAGenome Projectprotein kinase binding
GO:0016538IEAInterProcyclin-dependent protein serine/threonine kinase regulator activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G27620
GO:0004672ISOPLAZA Integrative Orthologyprotein kinase activityAT5G27620

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005675IEAGenome Projectholo TFIIH complex
GO:0070985IEAInterProTFIIK complex
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G27620
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G27620

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013763Cyclin-like
IPR006671Cyclin, N-terminal
IPR027081CyclinH/Ccl1
IPR015429Cyclin C/H/T/L

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.